No definition available.
Endpoint definition
↥
Endpoint definition steps |
FinnGen |
---|---|
Phenotype data |
520210 |
1. Apply sex-specific ruleNone |
520210 |
2. Check conditionsNone |
520210 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters:
3 out of 7 registries used, show all original rules. |
434 |
4. Check minimum number of eventsNone |
434 |
5. Include endpointsNone |
434 |
6. Filter based on genotype QC (FinnGen only) |
434 |
Control definitions (FinnGen only)
Controls for this endpoint are individuals that are not cases.
Extra metadata
- First used in FinnGen datafreeze
- DF7
Summary Statistics
↥-FinRegistry-
Key figures
All | Female | Male | |
---|---|---|---|
Number of individuals | |||
Whole population | 2799 | 1597 | 1191 |
Only index persons | 2669 | 1527 | 1142 |
Unadjusted period prevalence (%) | |||
Whole population | 0.04 | 0.05 | 0.03 |
Only index persons | 0.05 | 0.06 | 0.04 |
Median age at first event (years) | |||
Whole population | 55.06 | 55.67 | 54.28 |
Only index persons | 55.73 | 56.39 | 54.85 |
-FinnGen-
Key figures
All | Female | Male | |
---|---|---|---|
Number of individuals | 434 | 263 | 171 |
Unadjusted period prevalence (%) | 0.08 | 0.09 | 0.08 |
Median age at first event (years) | 59.84 | 58.23 | 62.31 |
-FinRegistry-
Age distribution of first events
-FinnGen-
Age distribution of first events
-FinRegistry-
Year distribution of first events
-FinnGen-
Year distribution of first events
-FinRegistry-
Cumulative Incidence Function
-FinnGen-
Cumulative Incidence Function
CodeWAS (R11)
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
Matched cohort
- Matched cases
- 375
- Matched controls
- 3748
LabWAS
↥Mortality – FinRegistry
↥Association
Association between endpoint K11_HYPERTROPHY_TONGUE_PAPILLAE and mortality.
Females
Parameter | HR [95% CI] | p-value |
---|---|---|
K11_HYPERTROPHY_TONGUE_PAPILLAE | 1.156 [0.89, 1.5] | 0.272 |
Birth year | 0.998 [0.99, 1.01] | 0.573 |
During the follow-up period (1.1.1998 — 31.12.2019), 117 out of 1269 females with K11_HYPERTROPHY_TONGUE_PAPILLAE died.
Males
Parameter | HR [95% CI] | p-value |
---|---|---|
K11_HYPERTROPHY_TONGUE_PAPILLAE | 1.423 [1.07, 1.89] | 0.014 |
Birth year | 0.988 [0.98, 1.0] | 0.011 |
During the follow-up period (1.1.1998 — 31.12.2019), 126 out of 937 males with K11_HYPERTROPHY_TONGUE_PAPILLAE died.
Mortality risk
Mortality risk for people of age
years, who have K11_HYPERTROPHY_TONGUE_PAPILLAE.N-year risk | Females | Males |
---|---|---|
1 | 0.14% | 0.29% |
5 | 0.731% | 1.595% |
10 | 1.941% | 4.474% |
15 | 3.717% | 8.043% |
20 | 6.267% | 13.1% |
Relationships between endpoints
↥Index endpoint: K11_HYPERTROPHY_TONGUE_PAPILLAE – Hypertrophy of tongue papillae
GWS hits: 1