No definition available.
Endpoint definition
↥
Endpoint definition steps |
FinnGen |
---|---|
Phenotype data |
520210 |
1. Apply sex-specific ruleonly females |
293373 |
2. Check conditionsNone |
293373 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters:
2 out of 7 registries used, show all original rules. |
482 |
4. Check minimum number of eventsNone |
482 |
5. Include endpointsNone |
482 |
6. Filter based on genotype QC (FinnGen only) |
482 |
Control definitions (FinnGen only)
Controls for this endpoint are individuals that are not cases.
Extra metadata
- First used in FinnGen datafreeze
- DF7
Similar endpoints
↥List of similar endpoints to HSIL lesion of the vagina based on the number of shared cases.
Similar with more cases:
- All dysplastic lesions of the vagina
- HSIL lesion of the cervix uteri, vagina or vulva
- All dysplastic lesions of the cervix uteri, vagina or vulva
- Any operation in hilmo
- Any event in hilmo or specialist outpatient
Similar with less cases:
None
Case counts by codes
↥Summary Statistics
↥-FinRegistry-
Key figures
All | Female | Male | |
---|---|---|---|
Number of individuals | |||
Whole population | 2714 | 2714 | - |
Only index persons | 2571 | 2571 | - |
Unadjusted period prevalence (%) | |||
Whole population | 0.08 | 0.08 | - |
Only index persons | 0.09 | 0.09 | - |
Median age at first event (years) | |||
Whole population | - | 49.94 | - |
Only index persons | - | 48.76 | - |
-FinnGen-
Key figures
All | Female | Male | |
---|---|---|---|
Number of individuals | 482 | 482 | - |
Unadjusted period prevalence (%) | 0.16 | 0.16 | - |
Median age at first event (years) | 49.80 | 49.80 | - |
-FinRegistry-
Age distribution of first events
-FinnGen-
Age distribution of first events
-FinRegistry-
Year distribution of first events
-FinnGen-
Year distribution of first events
-FinRegistry-
Cumulative Incidence Function
-FinnGen-
Cumulative Incidence Function
CodeWAS (R11)
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
Matched cohort
- Matched cases
- 427
- Matched controls
- 4268
LabWAS
↥Mortality – FinRegistry
↥Association
Association between endpoint N14_VAGINAL_HSIL and mortality.
Females
Parameter | HR [95% CI] | p-value |
---|---|---|
N14_VAGINAL_HSIL | 1.265 [1.08, 1.48] | 0.003 |
Birth year | 0.998 [0.99, 1.01] | 0.566 |
During the follow-up period (1.1.1998 — 31.12.2019), 266 out of 2226 females with N14_VAGINAL_HSIL died.
Males
No dataMortality risk
Mortality risk for people of age
years, who have N14_VAGINAL_HSIL.N-year risk | Females | Males |
---|---|---|
1 | 0.089% | No data |
5 | 0.774% | No data |
10 | 1.998% | No data |
15 | 3.721% | No data |
20 | 6.738% | No data |
Relationships between endpoints
↥Index endpoint: N14_VAGINAL_HSIL – HSIL lesion of the vagina
GWS hits: -