LSIL lesion of the vagina

N14_VAGINAL_LSIL

Endpoint definition

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

519972

1. Apply sex-specific rule

only females

293218

2. Check conditions

None

293218

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 N89.0
  • Cause of death: ICD-10 N89.0

2 out of 7 registries used, show all original rules.

572

4. Check minimum number of events

None

572

5. Include endpoints

None

572

6. Filter based on genotype QC (FinnGen only)

551

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

First used in FinnGen datafreeze
DF7

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 2429 2429 -
Only index persons 2363 2363 -
Unadjusted period prevalence (%)
Whole population 0.07 0.07 -
Only index persons 0.09 0.09 -
Median age at first event (years)
Whole population - 50.78 -
Only index persons - 50.56 -

-FinnGen-

Key figures

All Female Male
Number of individuals 551 551 -
Unadjusted period prevalence (%) 0.20 0.20 -
Median age at first event (years) 52.54 52.54 -

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

CodeWAS

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
572
Matched controls
5720
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
R87.6
ICD-10 Finland
Abnormal findings in specimens from female genital organs, abnormal cytological findings
34.2
307.7
440
508
N89.0
ICD-10 Finland
Mild vaginal dysplasia
+∞
307.7
572
*
LEB00
NOMESCO Finland
Biopsy of vagina
143.0
307.7
319
50
ULA02
NOMESCO Finland
Kolposcopy
61.2
307.7
490
509
LEB30
NOMESCO Finland
Destruction of lesion of vaginal mucosa
195.7
299.5
146
10
XLD00
NOMESCO Finland
Sytologyspecimen from mouth of uterus
15.6
254.2
371
606
LDA20
NOMESCO Finland
Biopsy of vaginal cervix
16.1
247.9
285
332
N87.0
ICD-10 Finland
Mild cervical dysplasia
26.4
240.6
183
100
LFB00
NOMESCO Finland
Biopsy of vulva or perineum
21.2
173.1
141
87
A63.0
ICD-10 Finland
Anogenital (venereal) warts
18.1
170.4
152
112
LDA10
NOMESCO Finland
Curettage of cervix uteri
11.1
132.7
166
204
LDC03
NOMESCO Finland
Conisation of cervix uteri using diathermy or laser
11.4
130.3
157
183
R87.5
ICD-10 Finland
Abnormal findings in specimens from female genital organs, abnormal microbiological findings
20.5
122.4
98
57
N89.1
ICD-10 Finland
Moderate vaginal dysplasia
273.9
72.1
72
*
N90.0
ICD-10 Finland
Mild vulvar dysplasia
108.2
62.4
67
7
N87.1
ICD-10 Finland
Moderate cervical dysplasia
10.0
57.9
70
79
LDB20
NOMESCO Finland
Electrocoagulation or laser therapy of cervix uteri
17.8
55.3
46
28
8077/2-C53.9
ICD-O-3
Squamous intraepithelial neoplasia, high grade of cervix uteri
11.0
50.3
56
56
N89.2
ICD-10 Finland
Severe vaginal dysplasia, not elsewhere classified
162.5
43.4
45
*
8077/2-C52.9
ICD-O-3
Squamous intraepithelial neoplasia, high grade of vagina, NOS
449.4
42.8
42
*
N87.2
ICD-10 Finland
Severe cervical dysplasia, not elsewhere classified
7.2
39.5
62
95
LC2BE
NOMESCO Finland
Transvaginal ultrasound examination of uterus, parametria and lower abdomen
2.5
25.6
303
1772
D06BB10
ATC
imiquimod; topical
4.7
25.5
63
147
L04AX01
ATC
azathioprine; systemic
5.5
24.7
50
98
N90.1
ICD-10 Finland
Moderate vulvar dysplasia
65.2
22.0
25
*
LFB20
NOMESCO Finland
Destruction of lesion of vulva or perineum
22.5
21.0
30
14
G01AA10
ATC
clindamycin; vaginal
2.5
21.0
178
877
ZXC10
NOMESCO Finland
Use of laser
6.4
19.6
33
54
N90.2
ICD-10 Finland
Severe vulvar dysplasia, not elsewhere classified
31.1
16.2
21
7
A63.8
ICD-10 Finland
Other specified predominantly sexually transmitted diseases
39.2
15.5
19
5
G03CA03
ATC
estradiol; nasal, systemic, rectal, transdermal, vaginal
2.0
13.4
381
2857
202
Kela drug reimbursment
Connective tissue diseases, rheumatoid arthritis and comparable disease
2.5
12.4
88
391
D06BB04
ATC
podophyllotoxin; topical
3.0
11.2
53
191
LEB10
NOMESCO Finland
Excision of lesion of vagina
15.9
10.9
17
11
8077/2-C51.9
ICD-O-3
Squamous intraepithelial neoplasia, high grade of vulva, NOS
28.6
10.8
14
5
NK6QA
NOMESCO Finland
Measurement of bone density from two or more locations with X-ray
2.7
9.9
57
229
X86
ICPC
Abnormal cervix smear
7.3
9.6
22
31
LCA06
NOMESCO Finland
Biopsy of endometrium
2.0
9.5
120
671
LFB10
NOMESCO Finland
Excision of lesion of vulva or perineum
8.5
9.1
19
23
ZXC00
NOMESCO Finland
Use of diathermy
9.6
8.3
16
17
LX1AE
NOMESCO Finland
Gynecological ultrasound examination as part of clinical examination
2.0
8.3
104
579
ULC02
NOMESCO Finland
Hysteroscopy
2.5
7.9
51
216
R87.7
ICD-10 Finland
Abnormal findings in specimens from female genital organs, abnormal histological findings
15.3
7.7
12
8
P01BA02
ATC
hydroxychloroquine; oral
2.2
7.7
68
331
L04AD02
ATC
tacrolimus; systemic
10.2
7.6
14
14
Z09.0
ICD-10 Finland
Follow-up examination after surgery for other conditions
2.2
7.4
66
323
R87.0
ICD-10 Finland
Abnormal findings in specimens from female genital organs, abnormal level of enzymes
20.3
7.2
10
5
R10.4
ICD-10 Finland
Other and unspecified abdominal pain
1.6
7.1
228
1659
N87.9
ICD-10 Finland
Dysplasia of cervix uteri, unspecified
12.4
6.6
11
9
L04AA06
ATC
mycophenolic acid; systemic
5.4
6.5
18
34
GD1DD
NOMESCO Finland
High resolution CT examination of lungs
2.9
6.5
29
102
M05BA04
ATC
alendronic acid; oral
2.3
6.4
50
231
Z11.3
ICD-10 Finland
Special screening examination for infections with a predominantly sexual mode of transmission
2.4
6.4
42
180
127
Kela drug reimbursment
Transplant complication
6.7
6.4
15
23
Z01.4
ICD-10 Finland
Gynaecological examination (general)(routine)
1.7
6.3
156
1057
T81.0
ICD-10 Finland
Haemorrhage and haematoma complicating a procedure, not elsewhere classified
2.5
6.3
40
169
ZYC05
NOMESCO Finland
Non-real-time text-based remote communication
5.4
6.2
17
32
B97.7
ICD-10 Finland
Papillomavirus as the cause of diseases classified to other chapters
12.7
6.1
10
8
XG410
NOMESCO Finland
Flow-volume spirometry
3.1
6.0
25
84
A12AX
ATC
Calcium, combinations with vitamin D and/or other drugs
1.6
6.0
199
1445

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
144
118
15.97
151.41
3.4
1.7
—
—
—
0
0
386
2194
3.34
40.57
3.8
2.0
—
—
—
0
0
96
422
2.53
13.95
1.4
1.4
—
—
—
0
0
94
447
2.32
11.38
4.0
3.5
—
—
—
0
0
439
3703
1.80
7.99
5.5
4.0
11.82
11.05
mm/h
0.71
405
3444
126
775
1.80
7.32
1.5
1.3
690.29
582.62
titre
0.27
35
168
13
16
8.28
6.36
3.8
2.8
—
—
—
0
0
290
2315
1.51
5.56
9.4
5.9
—
—
—
0
0
161
1136
1.58
5.41
2.6
2.0
—
—
—
0
0
302
2444
1.50
5.34
9.3
5.4
0.53
0.53
e9/l
0.05
272
2146
37
163
2.36
5.33
4.1
1.6
0.19
0.24
g/l
3.01
37
154
309
2514
1.50
5.32
9.2
5.4
2.01
1.96
e9/l
0.26
290
2259
313
2554
1.50
5.31
9.7
5.8
0.18
0.18
e9/l
0.06
286
2268
38
170
2.32
5.29
4.1
1.5
1.02
1.22
g/l
4.19
38
160
252
1970
1.50
5.25
6.9
4.9
1.22
1.22
mmol/l
0.14
220
1804
32
134
2.47
5.15
2.5
2.3
1.47
1.48
g/l
0.01
27
113
54
282
2.01
5.12
1.9
1.8
1.24
1.36
g/l
0.32
49
261
201
1506
1.52
5.11
2.6
2.0
—
—
—
0
0
24
87
2.84
5.10
2.8
3.9
40.35
23.62
mg/l
0.73
24
69
24
87
2.84
5.10
2.8
3.9
33.09
37.81
mg/l
0.22
24
71
300
2452
1.47
4.89
9.4
5.5
0.04
0.04
e9/l
0.14
270
2150
274
2202
1.47
4.86
8.0
5.6
1.22
1.22
mmol/l
0.14
232
1875
93
587
1.70
4.83
1.6
1.4
—
—
—
0
0
130
897
1.58
4.74
1.6
1.6
—
—
—
0
0
235
1840
1.47
4.72
5.7
4.0
36.88
36.24
g/l
1.18
217
1728
52
277
1.96
4.68
11.7
7.2
7.51
7.98
mmol/l
0.26
47
262
420
3697
1.51
4.52
10.4
6.7
75.20
75.48
u/l
0.06
398
3467
29
125
2.39
4.41
2.9
2.6
—
—
—
0
0
9
12
7.60
4.37
1.9
1.4
—
—
—
0
0
148
1070
1.52
4.35
4.9
3.3
—
—
—
0
0
281
2313
1.42
4.16
9.6
5.8
8.05
8.04
%
0.04
261
2165
147
1071
1.50
4.14
1.5
1.5
2.29
2.17
g/l
0.39
88
656
280
2305
1.42
4.14
9.2
5.5
2.71
2.78
%
0.23
260
2151
186
1422
1.46
4.11
3.4
2.3
56.75
56.72
u/l
0.00
177
1312
286
2374
1.41
3.98
9.5
5.6
30.44
29.33
%
1.09
266
2230
30
138
2.24
3.96
6.1
6.3
—
—
—
0
0
12
27
4.52
3.95
1.8
2.4
824.33
537.82
e6/l
0.91
12
22
283
2352
1.40
3.87
9.2
5.3
55.47
56.51
%
0.81
263
2207
32
153
2.16
3.86
1.6
1.2
15.89
2.09
u/ml
—
7
18
369
3214
1.42
3.82
5.5
4.1
—
1282.59
—
0
44
268
2213
1.40
3.78
9.5
5.5
0.72
0.71
%
0.21
249
2054
331
2833
1.40
3.77
12.4
8.5
3.69
3.89
e9/l
1.27
297
2491
19
72
2.70
3.76
1.9
1.3
—
—
—
0
0
98
671
1.56
3.66
2.6
2.2
94.82
108.87
ug/g
0.31
73
520
32
157
2.10
3.63
1.6
1.2
17.29
15.96
u/ml
—
8
32
145
1083
1.45
3.56
1.9
1.8
—
—
—
0
0
75
487
1.62
3.50
1.6
1.6
—
—
—
0
0
222
1798
1.38
3.42
1.9
1.9
99.01
98.81
pmol/l
0.02
105
892
13
37
3.57
3.42
2.5
3.3
—
—
—
0
0
91
626
1.54
3.32
3.2
2.5
4.45
4.69
e6/l
0.07
49
314
6
7
8.65
3.27
4.2
3.4
—
—
—
0
0
75
496
1.59
3.25
4.6
2.3
5.21
5.85
umol/l
0.29
67
427
19
78
2.49
3.25
1.7
1.3
119.67
125.90
u/ml
—
6
20
72
479
1.58
3.05
8.9
4.3
1.04
1.04
mmol/l
0.07
65
438
20
87
2.35
3.04
1.6
1.4
—
—
—
0
0
7
12
5.89
3.03
3.1
2.4
43.29
56.30
ug/l
—
7
12
378
3371
1.36
2.98
6.1
4.1
—
—
—
0
0
507
4767
1.56
2.89
4.5
4.1
5.63
5.73
mmol/l
1.48
450
4411
260
2203
1.33
2.86
2.7
2.3
78.72
77.35
nmol/l
0.34
226
2015
22
433
0.49
2.85
3.4
3.5
—
—
—
0
0
13
48
2.75
2.73
1.5
1.1
—
66.64
—
0
5
16
66
2.47
2.73
3.6
4.5
—
—
—
0
0
280
2409
1.32
2.72
8.4
5.5
9.38
9.50
umol/l
0.13
271
2279
546
5244
1.91
2.71
13.6
9.4
24.04
23.79
u/l
0.13
528
5080
146
1142
1.37
2.70
3.9
2.7
0.30
0.39
e6/l
0.37
110
848
144
1126
1.37
2.66
2.4
2.1
2.70
2.92
mg/l
0.73
115
963
57
372
1.59
2.63
1.4
1.3
—
—
—
0
0
10
30
3.37
2.61
1.8
2.1
29.84
44.65
%
—
10
30
25
128
2.00
2.59
1.5
1.2
44.34
27.45
u/ml
—
7
11
565
5525
2.85
2.58
22.8
17.1
39.63
39.76
%
0.29
539
5229
42
257
1.68
2.50
4.3
2.6
75.50
74.95
e9/l
0.04
33
193
145
1146
1.36
2.49
4.0
2.7
—
—
—
0
0
14
57
2.49
2.46
1.5
1.3
—
—
—
0
0
13
51
2.59
2.46
1.7
1.3
—
—
—
0
0
565
5531
2.76
2.45
22.7
17.1
4.39
4.44
e12/l
1.65
550
5399
565
5531
2.76
2.45
22.7
17.2
6.66
6.54
e9/l
0.22
549
5393
565
5531
2.76
2.45
22.6
17.0
30.29
30.11
pg
1.65
557
5463
565
5529
2.79
2.45
22.6
17.1
91.01
90.70
fl
0.94
557
5462
565
5528
2.80
2.44
22.7
17.2
270.70
265.61
e9/l
1.06
551
5409
522
4976
1.56
2.38
14.6
12.0
139.66
139.74
mmol/l
0.29
500
4833
5
8
6.29
2.37
2.0
2.0
—
—
—
0
0
270
2341
1.29
2.37
2.8
2.3
—
—
—
0
0
523
4989
1.56
2.36
14.9
12.0
3.91
3.92
mmol/l
0.33
500
4836
158
1276
1.33
2.34
1.3
1.3
0.67
1.94
u/ml
1.83
37
343
83
603
1.44
2.34
2.7
2.1
2.39
2.45
g/l
0.39
76
558
565
5532
2.74
2.31
22.8
17.2
132.14
132.98
g/l
1.03
557
5466
77
553
1.45
2.30
2.9
2.2
23.12
23.35
%
0.06
69
467
11
40
2.78
2.28
2.5
1.6
0.96
1.00
g/l
0.28
11
40
11
41
2.72
2.21
1.4
1.3
—
—
—
0
0
289
2548
1.27
2.15
5.2
3.9
6.37
6.43
mmol/l
0.14
265
2349
53
359
1.52
2.12
4.8
4.1
0.00
1.18
%
0.57
21
82
186
1556
1.29
2.11
4.9
3.3
65.13
67.37
e6/l
0.02
129
1033
180
1500
1.29
2.10
3.0
2.7
—
—
—
0
0
5
10
5.03
2.07
1.8
1.1
—
—
—
0
0
50
338
1.53
2.02
4.5
3.2
—
—
—
0
0
112
880
1.34
1.99
3.3
2.4
7.02
8.80
e6/l
0.34
103
791
86
649
1.38
1.97
3.0
2.2
12.91
13.96
umol/l
0.80
81
606
163
1936
0.78
1.96
1.9
2.6
—
—
—
0
0
87
659
1.38
1.95
4.5
2.9
0.81
0.81
mmol/l
0.06
77
620
152
1250
1.29
1.95
4.1
2.8
29.17
57.71
e6/l
0.99
118
941
9
33
2.75
1.94
3.7
3.7
30.24
17.51
mu/l
—
9
33
13
58
2.27
1.92
3.4
2.6
—
—
—
0
0
0
50
0.00
1.89
0.0
2.1
—
—
—
0
0
0
51
0.00
1.89
0.0
2.2
—
3.94
—
0
51
0
51
0.00
1.89
0.0
2.2
—
106.47
—
0
51
183
1546
1.27
1.89
3.1
3.0
18.19
26.18
ng/l
0.51
108
897
62
445
1.44
1.88
1.2
1.2
—
—
—
0
0
39
255
1.57
1.84
1.5
2.0
—
—
—
0
0
123
991
1.31
1.83
1.6
1.5
22.22
22.31
nmol/l
0.02
103
854
52
366
1.46
1.76
4.6
2.6
2.04
1.86
%
0.44
45
323
150
1247
1.28
1.75
9.7
6.4
—
—
—
0
0
51
359
1.46
1.73
4.6
3.9
0.10
0.95
%
3.70
20
95
55
393
1.44
1.72
4.9
4.0
0.39
1.16
%
2.80
23
113
7
24
2.94
1.72
1.3
1.4
143.14
167.86
mmol/24h
—
7
24
52
368
1.45
1.71
4.5
3.4
4.42
4.60
pmol/l
0.76
46
323
191
1638
1.25
1.71
5.4
2.9
29.31
28.02
u/l
0.41
185
1568
26
158
1.68
1.65
1.5
1.2
—
—
—
0
0
22
128
1.75
1.62
1.1
1.4
24.67
26.17
u/l
0.07
15
104
33
215
1.57
1.60
1.6
1.7
—
—
—
0
0
7
26
2.71
1.58
1.7
2.0
—
—
—
0
0
52
375
1.43
1.57
4.9
4.1
0.00
0.11
%
2.47
20
95
0
42
0.00
1.53
0.0
1.0
—
0.21
—
0
15
0
43
0.00
1.52
0.0
1.0
—
0.51
—
0
11
6
21
2.88
1.51
1.8
2.9
0.13
0.21
e9/l
—
6
21
38
260
1.49
1.50
10.3
7.4
—
—
—
0
0
13
65
2.02
1.49
5.0
2.9
27.62
31.90
umol/l
0.51
13
58
241
2146
1.21
1.47
10.6
8.3
0.00
0.00
e9/l
0.14
200
1761
9
38
2.39
1.46
1.0
1.1
312.67
289.97
mg/l
—
9
33
9
39
2.33
1.43
2.6
1.4
—
—
—
0
0
102
830
1.28
1.42
3.4
2.5
491.61
510.68
mosm/kgh2o
0.43
89
718
9
40
2.27
1.40
1.1
1.1
—
—
—
0
0
44
315
1.43
1.40
1.5
1.4
—
—
—
0
0
71
552
1.33
1.38
1.6
1.3
—
—
—
0
0
365
3395
1.21
1.37
4.0
2.8
38.33
39.13
u/l
0.10
346
3217
97
788
1.28
1.37
2.4
2.6
2.42
2.44
mmol/l
1.40
85
702
80
634
1.30
1.36
1.5
1.6
—
—
—
0
0
0
38
0.00
1.34
0.0
1.0
—
0.11
—
0
7
15
83
1.83
1.32
1.1
1.2
2.80
6.28
u/ml
—
5
29
5
18
2.79
1.28
1.8
1.7
—
—
—
0
0
183
1608
1.20
1.25
2.9
3.3
2.35
2.36
mmol/l
0.68
154
1441
24
155
1.57
1.25
5.0
3.1
—
—
—
0
0
8
37
2.18
1.22
1.1
1.3
—
—
—
0
0
30
206
1.48
1.20
1.1
1.2
—
—
—
0
0
420
4402
0.83
1.19
17.5
13.6
14.95
14.58
%
0.65
411
4330
82
665
1.27
1.18
1.3
1.2
—
—
—
0
0
115
970
1.23
1.18
4.6
3.7
—
—
—
0
0
5
20
2.51
1.15
1.0
1.6
130.80
144.90
nmol/l
—
5
20
512
4963
1.30
1.14
15.5
11.3
19.27
19.38
mg/l
0.02
411
3780
7
31
2.27
1.10
1.3
1.2
12.57
25.84
umol/l
—
7
31
7
31
2.27
1.10
6.7
8.5
—
—
—
0
0
19
120
1.60
1.10
5.3
5.1
—
—
—
0
0
5
21
2.39
1.09
1.2
1.6
115.20
71.24
nmol/24h
—
5
21
88
728
1.25
1.09
1.6
1.7
1021.54
1203.89
nmol/l
1.31
66
547
5
22
2.28
1.03
2.8
3.6
—
—
—
0
0
7
34
2.07
1.03
3.3
3.1
—
—
—
0
0
535
5228
1.36
1.03
13.6
10.6
—
—
—
0
0
507
4920
1.27
1.03
4.3
4.1
4.94
4.89
mmol/l
0.55
465
4627
7
35
2.01
1.00
1.0
1.1
—
—
—
0
0
46
354
1.33
1.00
5.0
3.0
94.72
73.97
ng/l
0.56
41
318
151
1331
1.18
0.99
2.7
2.0
93.76
190.26
u/l
1.31
144
1259
0
29
0.00
0.98
0.0
1.1
—
—
—
0
0
6
28
2.15
0.91
1.2
1.1
—
—
—
0
0
261
2414
1.15
0.90
4.3
3.4
0.00
0.00
estimate
-0.00
40
496
59
477
1.26
0.90
2.4
2.1
393.98
370.65
nmol/l
0.45
52
443
39
298
1.33
0.90
1.7
2.6
66.46
67.40
g/l
0.30
34
272
6
29
2.08
0.89
1.0
1.1
—
—
—
0
0
12
71
1.70
0.89
1.0
1.0
—
—
—
0
0
131
1151
1.18
0.89
3.6
3.1
84.97
293.39
mg/l
0.97
65
690
40
308
1.32
0.88
1.3
1.2
—
—
—
0
0
69
571
1.24
0.87
1.7
1.3
—
—
—
0
0
261
2422
1.14
0.85
5.8
4.7
0.00
0.00
estimate
0.50
41
474
31
232
1.36
0.83
1.5
1.3
127.01
233.38
miu/ml
0.96
14
115
143
1274
1.16
0.82
3.5
2.9
6.56
6.98
mmol/l
0.77
122
1097
12
73
1.66
0.82
1.3
1.3
—
—
—
0
0
33
250
1.34
0.82
1.1
1.1
—
—
—
0
0
213
1954
1.14
0.82
4.1
3.2
6.24
5.91
ph
0.63
17
165
104
905
1.18
0.80
1.5
1.6
460.51
36788006.60
pmol/l
1.31
90
772
0
24
0.00
0.79
0.0
1.1
—
1544.15
—
0
13
0
25
0.00
0.79
0.0
1.3
—
—
—
0
0
44
350
1.28
0.78
2.2
2.8
11.35
5.22
e9/l
0.38
37
300
0
27
0.00
0.77
0.0
1.4
—
—
—
0
0
140
1252
1.16
0.77
3.5
3.1
—
—
—
0
0
10
59
1.71
0.76
2.5
1.7
35.81
70.26
u/ml
—
10
59
131
1168
1.16
0.75
1.8
1.7
0.96
0.90
mg/l
0.12
91
889
5
24
2.09
0.74
2.6
2.8
42200.00
35737.71
ug/l
—
5
24
5
24
2.09
0.74
2.8
3.8
5329.00
711.17
u/ml
—
5
24
502
4898
1.20
0.74
4.4
4.0
1.61
1.59
mmol/l
0.33
452
4585
261
2443
1.13
0.71
4.3
3.4
0.00
0.01
estimate
0.80
41
463
16
109
1.48
0.71
1.8
2.1
—
—
—
0
0
117
1039
1.16
0.71
1.3
1.3
12.20
12.11
u/ml
0.00
44
420
5
26
1.93
0.70
1.0
1.1
—
—
—
0
0
5
95
0.52
0.67
1.6
4.6
—
—
—
0
0
125
1388
0.87
0.66
3.0
3.1
—
—
—
0
0
5
28
1.79
0.66
3.2
1.5
29.97
25.79
ug/l
—
5
28
38
305
1.26
0.65
5.5
3.1
5.77
5.85
kpa
0.20
38
300
28
216
1.31
0.64
2.8
2.3
—
—
—
0
0
80
696
1.17
0.63
1.3
1.1
—
—
—
0
0
66
766
0.84
0.63
2.6
3.2
220.67
269.74
ng/l
0.11
42
490
5
30
1.67
0.61
1.2
1.6
1.43
1.03
promille
—
5
22
0
20
0.00
0.60
0.0
1.1
—
—
—
0
0
0
21
0.00
0.60
0.0
1.5
—
—
—
0
0
0
21
0.00
0.60
0.0
1.3
—
9.20
—
0
5
11
72
1.54
0.59
1.3
1.8
—
—
—
0
0
0
23
0.00
0.58
0.0
1.0
—
0.78
—
0
10
0
23
0.00
0.58
0.0
1.1
—
41937.00
—
0
10
458
4459
1.14
0.58
5.1
4.9
37.61
38.50
mmol/mol
1.97
413
4173
509
4992
1.18
0.58
4.7
4.5
2.93
2.90
mmol/l
0.31
459
4663
117
1056
1.14
0.57
1.4
1.3
22.27
29.44
iu/ml
0.62
33
354
50
589
0.83
0.57
1.4
1.3
—
—
—
0
0
29
360
0.80
0.54
3.7
3.5
1.23
1.23
mmol/l
0.45
29
314
38
314
1.23
0.53
5.5
3.1
—
—
—
0
0
13
91
1.44
0.53
1.2
1.4
—
—
—
0
0
6
39
1.54
0.53
1.2
1.1
—
—
—
0
0
16
117
1.38
0.52
2.0
2.3
—
—
—
0
0
35
423
0.82
0.52
1.4
1.3
33.84
28.80
iu/l
0.31
27
361
435
4231
1.12
0.52
4.6
4.4
14.52
14.46
pmol/l
0.18
402
3928
12
83
1.46
0.52
1.2
1.2
—
—
—
0
0
20
153
1.32
0.51
1.5
1.4
352.64
304.18
ug/g
0.48
14
86
257
2440
1.10
0.50
3.3
2.8
88.42
78.07
ug/l
0.61
237
2287
7
46
1.53
0.48
1.1
1.1
—
—
—
0
0
131
1205
1.11
0.48
4.0
3.6
18.61
8.99
mg/mmol
0.59
67
709
7
47
1.50
0.47
1.0
1.2
—
—
—
0
0
481
4713
1.13
0.47
3.9
3.6
1.23
1.23
mmol/l
0.07
427
4386
12
85
1.42
0.47
1.2
1.2
—
—
—
0
0
42
492
0.84
0.47
1.7
1.4
—
—
—
0
0
13
176
0.73
0.46
1.3
1.4
—
—
—
0
0
13
176
0.73
0.46
1.3
1.4
—
—
—
0
0
5
83
0.60
0.46
1.0
1.8
—
—
—
0
0
123
1131
1.11
0.45
4.0
2.3
309.60
4693.11
umol/l
3.88
107
1004
113
1035
1.11
0.45
5.4
3.6
1.02
1.02
kg/l
—
8
149
6
94
0.63
0.42
1.2
1.1
—
—
—
0
0
18
140
1.29
0.42
2.3
2.9
0.56
0.24
g/l
—
7
42
5
32
1.57
0.42
10.0
1.3
67.68
6.69
ug/l
—
5
26
5
33
1.52
0.41
1.4
1.4
—
—
—
0
0
0
15
0.00
0.41
0.0
1.0
—
—
—
0
0
0
15
0.00
0.41
0.0
1.1
—
—
—
0
0
8
59
1.36
0.41
1.3
1.4
44.75
65.02
mmol/l
—
8
52
5
34
1.47
0.40
1.0
1.2
—
—
—
0
0
16
204
0.78
0.39
1.4
1.3
—
—
—
0
0
0
19
0.00
0.39
0.0
1.2
—
—
—
0
0
142
1332
1.09
0.36
6.2
3.4
7.41
7.40
ph
0.31
18
268
35
302
1.17
0.35
9.1
6.1
1.33
1.21
mmol/l
0.17
35
295
7
53
1.32
0.31
3.1
1.8
69.00
57.66
%
—
7
53
20
166
1.21
0.30
1.2
1.2
—
—
—
0
0
19
157
1.22
0.30
4.3
2.3
0.65
0.66
%
0.03
19
157
17
206
0.82
0.29
3.1
5.2
—
—
—
0
0
8
107
0.74
0.29
3.4
4.1
60.13
58.77
%
—
8
107
10
76
1.32
0.28
1.0
1.1
—
—
—
0
0
8
65
1.23
0.27
1.3
1.2
—
—
—
0
0
31
272
1.15
0.26
1.1
1.1
—
226.87
—
0
8
5
71
0.70
0.26
1.4
1.1
—
—
—
0
0
30
263
1.15
0.26
2.5
2.2
5.38
5.72
ug/l
0.06
23
231
9
74
1.22
0.25
1.8
1.3
—
—
—
0
0
15
180
0.83
0.24
1.3
1.4
—
—
—
0
0
189
1819
1.06
0.24
11.0
8.9
1.10
1.12
inr
0.18
40
581
5
38
1.32
0.23
1.0
1.1
—
6.07
—
0
10
5
38
1.32
0.23
1.0
1.1
25.70
27.67
nmol/l
—
5
28
19
162
1.18
0.23
4.3
2.3
1.11
1.09
%
0.04
19
162
16
134
1.20
0.23
1.2
1.1
—
—
—
0
0
7
93
0.75
0.22
3.1
2.0
—
—
—
0
0
15
178
0.84
0.22
14.3
8.6
—
—
—
0
0
40
440
0.90
0.22
1.6
1.8
—
—
—
0
0
39
429
0.90
0.21
3.8
3.9
3.19
8.29
ug/l
2.09
32
347
5
42
1.19
0.21
1.2
1.1
—
—
—
0
0
0
11
0.00
0.21
0.0
1.0
—
0.02
—
0
11
0
11
0.00
0.21
0.0
1.0
—
—
—
0
0
0
11
0.00
0.21
0.0
2.2
—
1.20
—
0
11
0
10
0.00
0.21
0.0
1.1
—
—
—
0
0
35
387
0.90
0.21
1.3
1.4
—
—
—
0
0
0
12
0.00
0.21
0.0
1.0
—
—
—
0
0
0
12
0.00
0.21
0.0
1.0
—
—
—
0
0
0
12
0.00
0.21
0.0
2.1
—
—
—
0
0
8
105
0.76
0.21
2.9
3.7
4.13
4.40
e9/l
—
8
105
0
13
0.00
0.21
0.0
1.1
—
—
—
0
0
0
14
0.00
0.20
0.0
1.6
—
—
—
0
0
9
115
0.78
0.20
1.1
1.0
—
—
—
0
0
21
238
0.88
0.19
1.0
1.1
—
—
—
0
0
14
164
0.85
0.18
2.4
1.9
2.99
5.54
iu/l
—
7
59
65
610
1.07
0.18
1.9
1.9
—
—
—
0
0
7
61
1.15
0.17
1.0
1.1
—
—
—
0
0
133
1281
1.05
0.17
5.2
3.6
0.00
0.01
estimate
1.08
40
478
8
73
1.10
0.15
2.9
2.1
—
—
—
0
0
140
1447
0.96
0.15
1.4
1.5
—
—
—
0
0
12
103
1.17
0.14
1.1
1.2
—
—
—
0
0
10
85
1.18
0.12
2.6
2.0
13.00
13.25
%
—
10
85
18
198
0.91
0.11
1.9
3.2
—
—
—
0
0
14
155
0.90
0.09
1.3
1.3
—
—
—
0
0
40
380
1.06
0.09
1.3
1.2
—
—
—
0
0
6
56
1.07
0.08
1.0
1.1
—
—
—
0
0
6
57
1.05
0.08
1.0
1.5
—
—
—
0
0
6
58
1.03
0.08
1.0
1.1
—
—
nmol/l
—
0
0
325
3281
0.98
0.08
3.5
3.2
—
—
—
0
0
129
1317
0.97
0.08
1.8
1.6
1.31
1.35
mmol/l
0.18
117
1136
484
4817
1.03
0.07
5.5
5.1
1.77
2.05
mu/l
0.58
443
4496
60
620
0.96
0.07
1.5
1.4
—
—
—
0
0
47
488
0.96
0.07
1.2
1.2
96.28
146.27
iu/ml
0.76
17
210
27
284
0.95
0.06
2.1
2.1
238.54
3636.13
u/l
—
7
120
18
192
0.94
0.05
1.3
1.4
—
—
—
0
0
10
90
1.11
0.05
1.3
1.1
—
—
—
0
0
20
212
0.94
0.05
1.3
1.6
—
—
—
0
0
11
100
1.10
0.05
1.1
1.1
—
—
—
0
0
11
100
1.10
0.05
1.1
1.1
—
—
—
0
0
15
160
0.94
0.04
1.2
1.3
—
—
—
0
0
18
190
0.95
0.04
1.1
1.4
—
—
—
0
0
31
299
1.04
0.04
2.4
2.4
—
—
—
0
0
17
179
0.95
0.03
1.3
1.4
—
—
—
0
0
60
589
1.02
0.03
2.7
1.8
28.56
29.39
s
0.62
60
569
62
631
0.98
0.02
1.9
1.8
—
—
—
0
0
13
134
0.97
0.00
1.4
1.6
—
—
—
0
0
12
123
0.98
0.00
1.2
1.1
0.60
2.33
u/ml
—
5
60
19
193
0.98
0.00
1.3
1.4
—
—
—
0
0
19
193
0.98
0.00
1.3
1.4
—
—
—
0
0
38
384
0.99
0.00
7.5
7.0
0.60
1.33
mmol/l
0.70
27
312
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.4
—
—
—
0
0
12
120
1.00
-0.00
1.1
1.2
3.34
3.66
mmol/l
1.17
12
109
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
33.93
—
0
6
0
6
0.00
-0.00
0.0
1.5
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
5
54
0.93
-0.00
1.4
1.2
—
—
—
0
0
0
7
0.00
-0.00
0.0
3.7
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
6
67
0.89
-0.00
1.2
2.2
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
7
0.00
-0.00
0.0
2.0
—
492.71
—
0
7
0
7
0.00
-0.00
0.0
1.7
—
—
—
0
0

Mortality – FinRegistry

Association

Association between endpoint N14_VAGINAL_LSIL and mortality.

Females

Parameter HR [95% CI] p-value
N14_VAGINAL_LSIL 1.229 [1.05, 1.44] 0.012
Birth year 1.0 [0.99, 1.01] 0.998

During the follow-up period (1.1.1998 — 31.12.2019), 199 out of 2071 females with N14_VAGINAL_LSIL died.

Males

No data

Mortality risk

Mortality risk for people of age

years, who have N14_VAGINAL_LSIL.

N-year risk Females Males
1 0.104% No data
5 0.814% No data
10 2.011% No data
15 4.023% No data
20 7.318% No data

Relationships between endpoints

Index endpoint: N14_VAGINAL_LSIL – LSIL lesion of the vagina

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
rg [CI]
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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