Benign neoplasm: Liver

CD2_BENIGN_LIVER

liver neoplasm: A benign or malignant epithelial neoplasm that affects the liver parenchyma and intrahepatic bile ducts. Representative examples of benign epithelial neoplasms include hepatocellular adenoma and intrahepatic bile duct adenoma. Representative examples of malignant epithelial neoplasms include hepatocellular carcinoma and intrahepatic cholangiocarcinoma.

Suggest a new description

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 D13.4&
  • Hospital discharge: ICD-8 21150
  • Cause of death: ICD-10 D13.4&
  • Cause of death: ICD-8 21150

2 out of 7 registries used, show all original rules.

786

4. Check minimum number of events

None

786

5. Include endpoints

None

786

6. Filter based on genotype QC (FinnGen only)

786

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy
4
First used in FinnGen datafreeze
DF2
Parent code in ICD-10
D13
Name in latin
Neoplasma benignum hepatis

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 3928 2744 1154
Only index persons 3579 2565 1014
Unadjusted period prevalence (%)
Whole population 0.06 0.08 0.03
Only index persons 0.08 0.09 0.04
Median age at first event (years)
Whole population 51.46 48.25 58.77
Only index persons 50.04 46.94 57.87

-FinnGen-

Key figures

All Female Male
Number of individuals 786 574 212
Unadjusted period prevalence (%) 0.17 0.20 0.09
Median age at first event (years) 52.28 48.71 61.94

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
677
Matched controls
6768
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
D13.4
ICD-10 Finland
Benign neoplasm: Liver
4503599627370496.0
323.0
666
*
D37.6
ICD-10 Finland
Neoplasm of uncertain or unknown behaviour: Liver, gallbladder and bile ducts
86.8
145.6
160
24
JN1CG
NOMESCO Finland
Extensive MRI examination of upper part of abdomen with high intensity magnet
25.6
96.8
138
67
JJ2AT
NOMESCO Finland
Biopsy of liver with ultrasound guidance
15.5
58.6
99
74
JN1AE
NOMESCO Finland
Ultrasound examination of upper part of abdomen
6.2
50.0
147
288
JN1DG
NOMESCO Finland
Very extensive MRI examination of upper part of abdomen with high intensity magnet
19.3
49.3
76
44
R93.2
ICD-10 Finland
Abnormal findings on diagnostic imaging of liver and biliary tract
38.5
31.9
40
11
R10.4
ICD-10 Finland
Other and unspecified abdominal pain
2.6
28.9
314
1700
R10.1
ICD-10 Finland
Pain localized to upper abdomen
3.1
26.1
165
633
JN3CD
NOMESCO Finland
Abdominal CT examination both without and with contrast
7.5
24.0
58
84
UJD10
NOMESCO Finland
Esophagoscopy, gastroscopy and duodenoscopy
2.5
22.5
228
1148
JN3BD
NOMESCO Finland
Extensive abdominal CT
3.3
19.8
108
366
K76.89
ICD-10 Finland
Other specified diseases of liver
43.2
17.4
21
5
JN3KE
NOMESCO Finland
Abdominal ultrasound with added contrast
28.3
16.6
22
8
JN1BG
NOMESCO Finland
MRI examination of upper part of abodmen with high intensity magnet
13.2
16.3
28
22
D18.0
ICD-10 Finland
Haemangioma, any site
7.1
16.0
39
58
JN3AE
NOMESCO Finland
Abdominal ultrasound examination
2.7
16.0
123
522
UJF32
NOMESCO Finland
Coloscopy
2.2
15.9
193
1031
D37.7
ICD-10 Finland
Neoplasm of uncertain or unknown behaviour: Other digestive organs
6.4
13.5
35
57
JN1CD
NOMESCO Finland
Very extensive CT examination of upper part of abdomen
12.6
12.7
22
18
JJB71
NOMESCO Finland
Laparoscopic resection of liver
+∞
12.5
12
*
R10.3
ICD-10 Finland
Pain localized to other parts of lower abdomen
2.0
12.2
181
1038
A02BC02
ATC
pantoprazole; systemic
1.8
12.1
435
3373
C22.0
ICD-10 Finland
Malignant neoplasm: Liver cell carcinoma
16.8
11.7
18
11
8170/3-C22.0
ICD-O-3
Hepatocellular carcinoma, NOS, of liver
30.6
11.7
15
5
21150
ICD-8 Finland
Benign neoplasm of other parts of digestive system, Hepatis
+∞
11.5
11
*
J01MA02
ATC
ciprofloxacin; systemic
1.7
10.1
255
1740
K76.80
ICD-10 Finland
Hepatic cyst
8.8
9.3
19
22
Z04.8
ICD-10 Finland
Examination and observation for other specified reasons
2.2
9.2
92
444
WX408
NOMESCO Finland
General anesthesy, balanced
1.8
8.9
183
1161
A02BC03
ATC
lansoprazole; oral
1.8
8.8
188
1208
N02AX02
ATC
tramadol; systemic, rectal
1.7
8.7
267
1902
JN3CG
NOMESCO Finland
Extensive MRI examination of abdomen with high intensity magnet
16.5
8.6
13
8
JJ3AT
NOMESCO Finland
Cytology of liver with ultrasound guidance
27.9
8.5
11
*
C22.9
ICD-10 Finland
Malignant neoplasm: Liver, unspecified
27.9
8.5
11
*
A02BC05
ATC
esomeprazole; systemic
1.6
8.3
262
1878
A09
ICD-10 Finland
Other gastroenteritis and colitis of infectious and unspecified origin
2.0
8.3
119
666
K76.9
ICD-10 Finland
Liver disease, unspecified
6.9
8.1
19
28
JN3DG
NOMESCO Finland
Very extensive MRI examination with high intensity magnet
11.9
8.1
14
12
JN1BD
NOMESCO Finland
Extensive CT examination of upper part of abdomen
11.0
7.8
14
13
K57.3
ICD-10 Finland
Diverticular disease of large intestine without perforation or abscess
2.0
7.7
100
534
D41.0
ICD-10 Finland
Neoplasm of uncertain or unknown behaviour: Kidney
5.0
7.6
23
47
N02BE01
ATC
paracetamol; systemic, rectal
1.8
7.6
568
5041
130
Kela drug reimbursment
Malignant tumour
2.6
7.6
55
223
A06AC01
ATC
ispaghula (psylla seeds); oral
1.8
7.5
154
969
JN4CD
NOMESCO Finland
Very extensive body CT
3.6
7.5
32
92
P01AB01
ATC
metronidazole; oral, rectal
1.6
7.4
272
2012
R51.80
ICD-10 Finland
Headache
1.9
7.2
107
606
C78.7
ICD-10 Finland
Secondary malignant neoplasm of liver and intrahepatic bile duct
5.4
7.1
20
38
WX302
NOMESCO Finland
Thoracal epidural anesthesy
2.8
7.0
42
155
R06.0
ICD-10 Finland
Dyspnoea
1.7
6.9
153
983
B01AB05
ATC
enoxaparin; parenteral
1.6
6.8
188
1288
JJB30
NOMESCO Finland
Excision of two segments of liver
40.4
6.8
8
*
K30
ICD-10 Finland
Functional dyspepsia
2.1
6.7
73
364
A02BC01
ATC
omeprazole; systemic
1.7
6.7
174
1168
K76.0
ICD-10 Finland
Fatty (change of) liver, not elsewhere classified
4.0
6.7
25
64
C22.1
ICD-10 Finland
Malignant neoplasm: Intrahepatic bile duct carcinoma
22.8
6.7
9
*
JFA15
NOMESCO Finland
Endoscopic polypectomy in colon
2.9
6.7
38
134
JJA21
NOMESCO Finland
Laparoscopic biopsy of liver
12.4
6.6
11
9
K80.2
ICD-10 Finland
Calculus of gallbladder without cholecystitis
2.0
6.5
86
465
Z03.89
ICD-10 Finland
Observation for other suspected diseases and conditions
2.0
6.5
82
435
UKC02
NOMESCO Finland
Cystoscopy
2.0
6.5
89
485
Z01.8
ICD-10 Finland
Other specified special examinations
1.7
6.5
142
910
D13.9
ICD-10 Finland
Benign neoplasm: Ill-defined sites within the digestive system
70.5
6.4
7
*
GD1AA
NOMESCO Finland
Thorax X-ray examination
1.5
6.2
248
1853
UJF45
NOMESCO Finland
Flexible sigmoidoscopy with biopsy
2.2
6.1
57
267
TPH04
NOMESCO Finland
Cathetrisation of vein
1.7
6.0
133
852

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
146
74
24.00
194.59
1.8
2.1
3.5
59.4
u/ml
0.51
146
68
154
209
8.92
111.16
2.2
3.2
11.0
1370.9
u/ml
0.98
136
181
251
569
6.01
111.05
2.5
4.0
2.6
14.6
ug/l
0.92
170
458
584
3256
4.09
68.98
6.8
5.7
10.4
10.6
umol/l
0.18
561
3087
64
48
14.43
68.91
1.3
1.2
—
—
—
0
0
84
101
9.19
65.87
1.9
4.1
143.9
453.1
u/ml
0.57
77
96
194
564
4.24
60.29
2.4
2.1
0.2
0.2
g/l
0.61
187
530
220
705
3.94
59.64
3.9
2.4
5.2
6.8
umol/l
1.92
194
613
462
2548
2.97
48.53
5.6
4.3
36.2
36.2
g/l
0.09
438
2385
424
2256
2.91
47.23
7.0
7.4
1.2
1.2
inr
0.01
91
691
684
4905
4.04
42.15
9.4
7.0
79.3
76.2
u/l
1.47
659
4619
317
1565
2.72
38.95
5.7
3.4
96.8
94.4
%
0.87
309
1513
355
1991
2.43
31.83
3.2
2.4
56.7
56.0
u/l
0.10
327
1850
73
165
4.77
30.54
1.3
1.1
52.5
88.6
titre
—
8
14
70
175
4.29
25.75
1.3
1.2
—
760.0
—
0
5
508
3589
2.17
23.34
6.1
4.4
6.6
6.5
mmol/l
0.20
487
3315
269
1520
2.17
21.85
2.4
2.1
—
—
—
0
0
111
434
2.81
20.19
8.0
7.1
7.7
8.9
mmol/l
0.89
105
416
442
3079
2.00
19.63
4.0
3.8
—
—
—
0
0
322
2028
2.00
18.92
2.5
2.1
—
—
—
0
0
168
838
2.28
18.14
2.9
2.2
2.5
2.4
g/l
1.10
157
774
158
770
2.32
18.02
3.1
2.2
23.9
23.0
%
0.31
145
665
176
911
2.20
17.30
3.0
2.2
14.2
13.6
umol/l
0.49
167
836
385
2655
1.88
16.62
7.8
5.5
1.2
1.2
mmol/l
0.06
355
2411
499
3751
1.90
16.32
8.7
8.7
4.4
4.0
e9/l
3.06
432
3311
600
4810
2.05
16.07
4.3
3.9
11.8
10.8
mm/h
0.88
561
4486
414
2952
1.85
15.79
8.6
6.1
1.2
1.2
mmol/l
0.02
371
2475
744
6577
3.46
15.24
16.8
12.3
23.7
21.2
mg/l
1.13
643
5147
16
15
10.87
14.68
1.4
3.9
—
—
—
0
0
120
566
2.32
14.58
3.1
2.3
31.4
36.1
u/l
0.58
98
480
448
3331
1.80
14.35
6.1
5.5
2.5
1.9
e9/l
0.56
388
2988
133
663
2.21
14.14
9.7
6.8
105.1
104.3
mmol/l
1.42
133
652
449
3356
1.79
13.97
6.3
5.8
0.2
0.2
e9/l
0.40
383
2991
743
6620
3.24
13.85
18.5
13.5
139.6
139.6
mmol/l
0.06
734
6448
435
3231
1.78
13.74
6.1
5.5
0.6
0.6
e9/l
0.60
371
2835
436
3245
1.77
13.63
6.1
5.5
0.0
0.0
e9/l
0.32
372
2847
743
6633
3.20
13.54
18.6
13.6
3.9
3.9
mmol/l
1.73
733
6447
534
4249
1.80
12.95
5.0
4.1
439.7
1907.6
e6/l
—
6
61
138
724
2.10
12.81
6.1
5.1
1.0
1.0
mmol/l
0.21
126
670
221
1371
1.85
12.58
1.6
1.5
2.1
2.3
g/l
0.77
149
862
304
2090
1.74
12.15
6.3
5.5
—
—
—
0
0
95
439
2.32
12.03
3.8
3.5
77.7
79.9
ng/l
0.12
79
396
161
925
1.93
11.51
1.5
1.3
615.8
524.0
titre
0.24
38
209
104
513
2.18
11.25
1.4
1.4
—
—
—
0
0
241
1587
1.75
11.01
1.4
1.2
0.6
1.7
u/ml
2.25
72
437
412
3131
1.66
10.98
6.3
5.6
28.8
28.6
%
0.11
389
2936
547
4488
1.72
10.78
4.6
4.0
—
—
—
0
0
305
2154
1.68
10.72
4.4
3.4
36.9
87.0
e6/l
1.45
206
1460
240
1590
1.73
10.68
3.2
2.8
—
—
—
0
0
151
875
1.90
10.44
2.0
2.3
124.8
113.2
ug/g
0.18
116
695
406
3105
1.64
10.31
6.2
5.3
57.8
56.9
%
0.87
384
2920
399
3040
1.63
10.28
6.6
5.8
7.9
8.3
%
2.23
377
2862
153
895
1.88
10.27
3.4
2.7
3.1
3.1
e6/l
0.00
80
468
397
3025
1.63
10.19
6.3
5.5
2.6
2.8
%
1.12
375
2827
228
1510
1.72
10.06
2.2
1.7
1.1
1.1
mg/l
0.01
179
1133
384
2913
1.62
9.96
6.3
5.6
0.6
0.7
%
0.50
361
2724
257
1769
1.67
9.77
3.7
3.0
54.8
100.8
e6/l
0.47
186
1343
60
248
2.54
9.69
2.8
1.8
23.0
21.3
s
0.36
52
219
223
1481
1.71
9.69
4.0
4.0
—
—
—
0
0
238
1610
1.69
9.65
3.4
2.8
0.3
0.4
e6/l
0.41
164
1188
113
609
2.00
9.63
9.3
7.8
5.2
5.1
kpa
0.58
113
584
152
906
1.84
9.57
1.3
1.2
—
—
—
0
0
127
720
1.91
9.33
1.4
1.3
—
—
—
0
0
111
606
1.97
9.10
9.1
7.9
0.4
1.2
mmol/l
1.32
94
474
226
1535
1.66
8.91
2.4
2.0
2.7
2.9
mg/l
0.71
193
1320
64
285
2.36
8.81
8.0
10.3
—
—
—
0
0
356
2714
1.57
8.63
2.6
2.0
—
—
—
0
0
139
835
1.81
8.47
1.5
1.6
—
—
—
0
0
152
956
1.73
7.88
3.7
3.0
0.8
0.8
mmol/l
0.10
138
897
297
2226
1.54
7.48
3.2
3.3
26.5
31.7
ng/l
0.32
176
1365
166
1087
1.67
7.38
3.4
3.4
1651.3
285.5
ng/l
0.48
112
759
222
1573
1.57
7.13
3.0
2.5
1456.1
5762.9
umol/l
2.10
197
1366
78
410
2.00
7.11
12.5
8.8
—
—
—
0
0
111
658
1.80
7.02
26.6
18.8
1.3
1.2
inr
—
10
89
277
2070
1.52
6.96
3.0
3.2
2.4
2.4
mmol/l
1.09
242
1836
138
874
1.70
6.92
2.2
2.0
—
—
—
0
0
79
425
1.95
6.74
1.6
1.4
—
—
—
0
0
92
522
1.86
6.69
1.4
1.2
—
—
—
0
0
385
3118
1.46
6.32
3.9
2.7
112.4
97.6
ug/l
0.77
365
2918
746
7004
2.28
6.30
13.5
9.5
28.6
25.3
u/l
4.77
731
6787
203
1453
1.54
6.11
3.6
3.3
—
—
—
0
0
27
94
2.94
6.10
1.0
1.1
5.9
5.7
u/ml
0.02
12
31
129
830
1.66
6.07
1.3
1.3
—
—
—
0
0
26
89
2.99
6.05
1.0
1.0
0.1
0.1
u/ml
—
8
19
308
2411
1.46
5.93
2.1
1.9
101.2
96.0
pmol/l
0.98
175
1275
32
125
2.63
5.86
1.0
1.1
1.7
6.0
u/ml
1.44
17
56
42
187
2.32
5.84
1.5
1.4
290.2
304.5
ug/g
0.15
22
109
34
138
2.53
5.77
1.1
1.1
0.8
1.6
u/ml
0.79
12
50
220
1627
1.49
5.60
7.5
6.2
—
—
—
0
0
235
1766
1.47
5.51
5.3
3.8
7.4
7.4
ph
0.44
32
338
243
1839
1.47
5.49
2.7
2.7
—
—
—
0
0
79
457
1.81
5.41
1.2
1.3
116.6
201.3
u/ml
0.82
72
419
30
120
2.56
5.26
1.0
1.1
0.3
0.9
u/ml
1.61
11
46
737
6947
1.98
5.20
15.9
11.6
—
—
—
0
0
152
1058
1.54
5.12
2.9
2.7
2.5
2.4
mmol/l
1.57
137
932
504
4391
1.41
5.00
3.7
3.4
—
—
—
0
0
75
438
1.79
4.99
2.0
2.4
7.7
6.2
ug/l
0.26
66
389
388
3239
1.39
4.92
5.2
4.5
0.0
0.0
estimate
0.50
56
630
391
3280
1.38
4.76
3.9
3.3
0.0
0.0
estimate
0.50
53
611
386
3234
1.38
4.72
4.0
3.3
0.0
0.0
estimate
0.00
53
625
162
1162
1.50
4.72
3.8
2.5
537.5
552.3
mosm/kgh2o
0.37
136
995
76
456
1.74
4.62
1.2
1.2
—
—
—
0
0
29
122
2.43
4.61
1.1
1.3
—
—
—
0
0
26
105
2.53
4.50
1.0
1.0
1.5
3.3
u/ml
0.80
13
31
28
118
2.42
4.44
1.0
1.0
0.4
1.8
u/ml
0.69
11
25
197
1486
1.43
4.40
2.8
3.0
1348.8
1054.9
ng/l
0.35
167
1239
51
275
1.91
4.38
1.6
1.7
—
—
—
0
0
53
290
1.89
4.36
2.7
2.3
—
—
—
0
0
106
710
1.57
4.21
1.8
1.6
—
—
—
0
0
91
590
1.61
4.14
2.1
2.5
1.9
1.8
%
0.27
81
521
27
116
2.37
4.12
2.5
2.2
—
—
—
0
0
583
5282
1.40
4.11
4.8
4.1
14.6
14.5
pmol/l
0.12
538
4865
34
162
2.15
4.09
6.2
3.9
3.8
3.8
mmol/l
0.40
34
150
40
204
2.01
4.04
6.2
4.5
—
—
—
0
0
167
1240
1.44
4.04
2.9
2.4
4.5
7.2
e6/l
2.58
140
1085
226
1774
1.38
3.97
2.1
2.0
152.5
207.2
u/l
0.57
213
1680
58
340
1.76
3.85
4.8
5.1
—
—
—
0
0
225
1785
1.36
3.67
3.6
3.1
7.7
7.6
mmol/l
0.11
199
1510
180
1377
1.40
3.66
1.6
1.5
19.2
21.1
nmol/l
1.05
152
1185
12
35
3.47
3.63
1.2
1.1
—
—
—
0
0
37
192
1.97
3.59
5.9
4.1
1.1
1.3
mmol/l
1.01
37
186
9
17
5.34
3.51
3.4
2.6
—
—
—
0
0
138
1014
1.44
3.51
1.7
1.7
1127.8
1196.4
nmol/l
0.41
108
777
24
106
2.30
3.48
1.4
1.2
—
—
—
0
0
663
6198
1.45
3.47
5.8
4.8
1.7
2.0
mu/l
0.93
621
5760
54
322
1.73
3.40
3.5
2.1
12.3
12.0
nmol/l
0.08
45
292
73
474
1.60
3.33
4.4
3.5
—
—
—
0
0
40
221
1.85
3.25
1.8
1.4
1.3
1.2
g/l
0.72
40
209
11
33
3.37
3.20
1.2
1.0
—
—
—
0
0
72
473
1.57
3.14
3.7
3.3
—
—
—
0
0
9
20
4.54
3.12
1.1
1.1
—
—
—
0
0
71
466
1.58
3.11
2.1
2.5
4.3
4.0
e9/l
0.45
49
381
65
420
1.60
3.04
2.4
2.5
67.7
72.5
e9/l
0.71
51
318
12
40
3.03
2.98
5.3
7.6
—
—
—
0
0
32
570
0.54
2.96
4.5
3.5
—
—
—
0
0
159
1235
1.36
2.91
1.3
1.3
28.1
31.7
iu/ml
0.15
44
397
85
592
1.49
2.86
4.1
3.6
—
—
—
0
0
18
77
2.37
2.83
2.9
2.2
—
—
—
0
0
211
1716
1.31
2.82
4.5
4.0
16.3
9.3
mg/mmol
0.63
150
1074
69
461
1.54
2.81
4.6
3.5
2.2
2.0
mmol/l
0.22
57
362
69
462
1.54
2.79
3.2
3.4
4.4
4.5
pmol/l
0.55
62
405
25
124
2.05
2.79
1.6
1.2
2.0
6.1
u/ml
1.00
12
43
41
242
1.73
2.72
1.3
1.4
—
4.1
—
0
5
201
1636
1.31
2.66
3.8
3.3
588.4
373.5
mg/l
0.24
141
1038
632
5932
1.33
2.63
6.5
5.2
39.8
39.0
mmol/mol
1.11
598
5565
759
7373
1.86
2.63
26.1
18.2
267.4
257.4
e9/l
3.28
743
7213
88
628
1.45
2.63
2.0
2.0
409.6
371.4
nmol/l
0.80
74
583
759
7376
1.84
2.58
26.1
18.1
90.3
90.7
fl
1.76
751
7287
155
1222
1.33
2.56
1.7
1.6
—
—
—
0
0
759
7377
1.84
2.56
26.0
18.1
30.0
30.2
pg
3.49
751
7287
759
7378
1.84
2.55
26.1
18.2
4.5
4.5
e12/l
0.42
744
7202
22
108
2.07
2.53
1.1
1.1
—
—
—
0
0
759
7379
1.83
2.53
26.2
18.2
7.1
6.6
e9/l
5.82
744
7195
38
225
1.72
2.51
2.1
2.2
1.5
1.5
g/l
0.03
32
193
150
1182
1.33
2.49
1.3
1.3
19.3
11.2
u/ml
0.46
66
472
21
102
2.09
2.49
1.2
1.0
—
—
—
0
0
11
39
2.85
2.48
1.1
1.1
1.6
0.2
u/ml
—
5
14
759
7382
1.82
2.48
26.3
18.3
134.5
134.9
g/l
0.45
752
7287
24
123
1.98
2.47
1.0
1.1
—
—
—
0
0
173
1393
1.31
2.47
4.8
3.6
1.0
1.0
kg/l
0.54
21
191
59
393
1.54
2.46
1.3
1.2
—
—
—
0
0
6
12
5.03
2.40
1.8
2.1
—
—
—
0
0
9
27
3.36
2.39
1.0
1.2
—
—
—
0
0
37
221
1.71
2.38
1.2
1.2
—
—
—
0
0
56
372
1.54
2.37
1.1
1.1
—
167.3
—
0
7
201
1661
1.28
2.35
4.0
3.5
—
—
—
0
0
105
790
1.38
2.35
1.3
1.4
—
—
—
0
0
600
5624
1.28
2.30
21.0
14.9
13.7
13.6
%
0.35
595
5526
684
6530
1.37
2.27
4.8
4.1
4.7
4.7
mmol/l
0.39
647
6124
326
2864
1.24
2.23
9.4
8.6
0.0
0.0
e9/l
0.21
258
2362
659
6264
1.32
2.20
4.3
3.6
1.4
1.3
mmol/l
5.42
614
5823
8
24
3.36
2.18
1.8
1.3
—
—
—
0
0
680
6497
1.35
2.15
4.7
4.0
1.5
1.5
mmol/l
1.58
637
6067
37
230
1.64
2.09
6.0
3.5
24.6
24.2
mmol/l
0.46
32
207
5
10
5.02
2.07
2.0
3.2
—
—
—
0
0
12
50
2.42
2.03
2.8
2.4
1.5
1.2
e9/l
—
6
25
201
1690
1.25
2.01
1.7
1.6
1.6
1.4
mmol/l
2.28
184
1442
15
70
2.17
1.99
4.0
4.9
11.1
59.8
u/ml
—
5
23
60
422
1.46
1.98
1.3
1.3
—
34.2
—
0
23
6
16
3.77
1.93
1.0
1.1
—
—
—
0
0
28
165
1.72
1.93
2.9
3.1
—
—
—
0
0
21
114
1.87
1.88
2.5
4.8
—
—
—
0
0
39
253
1.57
1.88
2.8
3.2
—
—
—
0
0
34
214
1.62
1.85
2.7
5.9
1.7
1.6
%
0.29
34
199
34
214
1.62
1.85
2.6
5.9
0.9
0.9
%
0.27
34
199
72
533
1.39
1.81
1.5
1.4
—
—
—
0
0
28
169
1.68
1.79
3.4
7.3
1.2
1.2
mmol/l
0.15
28
149
33
209
1.60
1.76
1.8
2.1
5.3
3.1
ug/l
0.21
26
186
5
13
3.86
1.71
1.6
1.5
—
—
—
0
0
52
368
1.44
1.69
1.7
2.0
5712.2
4039.4
u/l
0.18
15
153
51
360
1.45
1.68
2.1
2.4
—
—
—
0
0
21
119
1.79
1.67
3.0
8.1
11.6
11.1
mmol/l
0.25
21
107
21
119
1.79
1.67
3.0
8.1
103.0
105.2
mmol/l
1.03
21
107
687
6620
1.30
1.67
5.3
4.5
2.8
2.8
mmol/l
1.28
646
6178
8
31
2.60
1.66
1.5
2.5
4819.0
657.5
u/ml
—
8
31
29
182
1.62
1.62
1.4
1.2
1.6
3.0
u/ml
—
5
22
659
6325
1.26
1.60
4.8
4.2
5.9
5.8
mmol/l
0.77
617
5851
15
77
1.97
1.60
1.1
1.2
—
—
—
0
0
60
441
1.39
1.59
2.3
3.0
66.4
67.4
g/l
0.53
53
401
64
477
1.37
1.57
1.4
1.3
24.7
28.8
iu/l
0.49
54
413
6
22
2.74
1.43
38.8
25.1
6.9
7.2
ug/l
—
6
17
644
6186
1.23
1.42
20.1
13.0
39.8
39.9
%
0.05
500
4741
13
67
1.96
1.39
1.5
1.3
—
—
—
0
0
94
756
1.28
1.38
1.5
1.4
—
—
—
0
0
30
200
1.52
1.34
3.4
2.6
—
—
—
0
0
15
83
1.82
1.32
1.1
1.2
0.5
0.5
nmol/l
0.34
15
78
9
43
2.11
1.30
1.3
1.2
—
—
—
0
0
31
211
1.49
1.27
1.2
1.2
—
—
—
0
0
9
44
2.06
1.27
1.0
1.3
—
—
—
0
0
218
1934
1.18
1.23
1.4
1.5
—
—
—
0
0
20
124
1.63
1.21
1.7
1.4
—
—
—
0
0
81
652
1.27
1.20
1.5
1.4
—
—
—
0
0
13
71
1.84
1.20
1.4
1.1
—
—
—
0
0
18
109
1.67
1.19
2.2
1.5
—
—
—
0
0
6
26
2.32
1.19
1.7
1.7
—
—
—
0
0
32
224
1.45
1.16
1.3
1.4
—
—
—
0
0
13
72
1.82
1.15
1.9
1.4
—
37.2
—
0
5
5
20
2.51
1.15
1.6
1.2
—
—
—
0
0
92
757
1.24
1.14
3.1
2.8
0.9
0.7
ug/l
0.84
64
484
45
337
1.36
1.12
1.0
1.1
—
—
—
0
0
10
51
1.97
1.11
1.2
1.2
—
—
—
0
0
27
185
1.48
1.09
1.9
1.7
—
—
—
0
0
47
357
1.34
1.08
3.1
3.2
5.2
5.1
kpa
0.16
40
338
231
2546
0.87
1.03
2.4
2.6
—
—
—
0
0
194
1735
1.16
0.99
4.8
3.6
0.0
0.0
estimate
1.08
54
619
11
61
1.81
0.98
1.0
1.7
—
—
—
0
0
149
1306
1.17
0.98
5.5
4.7
2.8
2.2
ug/l
0.63
138
1165
9
51
1.77
0.94
1.1
1.0
—
—
—
0
0
18
117
1.55
0.94
1.3
1.2
176.5
274.1
u/ml
—
8
71
12
70
1.73
0.93
1.6
1.5
—
—
—
0
0
12
70
1.73
0.93
1.6
1.5
—
—
—
0
0
12
70
1.73
0.93
1.6
1.5
—
—
—
0
0
12
70
1.73
0.93
1.6
1.5
—
—
—
0
0
6
28
2.15
0.91
1.0
1.0
—
—
—
0
0
20
135
1.49
0.90
2.9
2.4
78.0
129.0
ug/min
0.38
13
80
13
79
1.66
0.88
1.8
1.3
—
—
—
0
0
15
96
1.57
0.85
1.7
1.5
—
—
—
0
0
8
138
0.58
0.84
1.1
1.9
—
—
—
0
0
27
197
1.38
0.83
1.2
1.2
11.6
11.8
u/l
0.03
18
157
17
113
1.52
0.82
1.6
1.3
93.5
113.8
u/ml
—
5
26
11
65
1.70
0.82
1.1
1.1
—
—
—
0
0
8
47
1.71
0.81
1.5
2.0
—
0.9
—
0
5
173
1560
1.14
0.79
2.9
4.4
—
—
—
0
0
7
123
0.57
0.78
4.3
2.4
—
—
—
0
0
6
34
1.77
0.76
2.7
2.7
—
—
—
0
0
10
59
1.70
0.76
1.6
1.8
—
—
—
0
0
11
67
1.65
0.75
1.3
1.1
—
—
—
0
0
28
210
1.35
0.74
4.2
3.2
0.2
0.3
g/l
0.09
13
79
36
281
1.29
0.74
1.4
1.4
—
—
—
0
0
5
25
2.01
0.72
1.4
1.2
—
—
—
0
0
141
1262
1.14
0.72
1.6
1.7
414.0
31814382.4
pmol/l
1.57
122
1075
36
282
1.29
0.72
1.4
1.4
—
—
—
0
0
9
57
1.59
0.71
1.0
1.0
180.2
219.1
mg/l
—
9
46
9
57
1.59
0.71
1.6
3.4
—
—
—
0
0
9
58
1.56
0.70
1.1
1.5
1.5
1.5
nmol/l
—
9
51
36
284
1.28
0.69
1.4
1.4
—
—
—
0
0
10
61
1.65
0.68
1.4
1.1
—
—
—
0
0
5
28
1.79
0.66
2.0
1.4
140.6
145.5
nmol/l
—
5
28
8
128
0.62
0.64
1.9
4.0
59.0
57.1
%
—
8
128
26
199
1.32
0.63
1.3
1.2
—
—
—
0
0
6
101
0.59
0.62
4.2
2.4
—
—
—
0
0
35
281
1.26
0.60
1.4
1.4
—
—
—
0
0
33
263
1.27
0.60
1.4
1.4
—
—
—
0
0
10
64
1.57
0.58
5.1
2.0
—
—
—
0
0
11
73
1.51
0.56
1.5
1.3
—
—
—
0
0
8
126
0.63
0.54
1.9
3.6
4.7
4.3
e9/l
—
8
126
12
82
1.47
0.54
1.6
1.7
—
—
—
0
0
9
60
1.51
0.54
1.2
1.1
33.4
31.9
mg/l
—
9
46
21
160
1.32
0.54
1.1
1.3
4.0
3.7
mmol/l
0.60
21
147
16
117
1.38
0.52
1.6
1.6
—
—
—
0
0
12
83
1.45
0.52
2.8
2.6
—
—
—
0
0
6
40
1.50
0.51
3.0
2.3
645.5
546.4
ml
—
6
21
20
154
1.31
0.49
1.4
1.4
23.9
28.3
u/l
0.24
15
129
32
263
1.23
0.48
1.3
1.2
—
—
—
0
0
7
49
1.43
0.46
3.4
2.5
—
—
—
0
0
18
139
1.30
0.44
1.1
1.4
0.3
0.4
nmol/l
0.65
13
111
22
175
1.26
0.43
1.1
1.4
467.8
436.8
mg/l
0.13
22
163
8
56
1.43
0.42
2.5
2.6
—
—
—
0
0
5
33
1.52
0.41
2.6
2.3
510.2
494.3
min
—
5
20
0
16
0.00
0.41
0.0
1.1
—
—
—
0
0
0
16
0.00
0.41
0.0
1.1
—
35.1
—
0
10
8
59
1.36
0.41
1.9
1.2
—
—
—
0
0
63
560
1.14
0.40
1.2
1.2
151.2
160.1
iu/ml
0.05
23
231
5
34
1.47
0.40
1.4
1.4
5.1
5.7
mmol/l
—
5
34
12
88
1.37
0.40
1.7
1.6
—
—
—
0
0
23
187
1.24
0.39
1.1
1.1
—
—
—
0
0
157
1480
1.08
0.33
1.9
1.9
—
—
—
0
0
14
109
1.29
0.33
1.8
1.7
—
—
—
0
0
14
109
1.29
0.33
1.2
1.6
—
—
—
0
0
74
810
0.90
0.33
1.4
1.3
—
—
—
0
0
24
285
0.84
0.33
4.1
2.9
—
—
—
0
0
7
52
1.35
0.31
1.7
1.3
5.9
6.4
mmol/l
—
7
47
7
52
1.35
0.31
4.3
2.9
—
—
—
0
0
7
52
1.35
0.31
1.0
1.2
—
—
—
0
0
17
138
1.24
0.30
1.6
1.6
6111.9
15400.7
e6/l
—
10
104
18
218
0.82
0.30
1.3
1.4
—
—
—
0
0
18
217
0.83
0.29
1.3
1.4
—
—
—
0
0
7
57
1.23
0.29
2.4
1.6
—
—
—
0
0
15
184
0.81
0.29
1.4
1.3
—
—
—
0
0
34
298
1.15
0.29
1.1
1.1
—
—
—
0
0
12
94
1.28
0.28
1.3
1.2
—
—
—
0
0
19
225
0.84
0.26
1.4
1.5
—
—
—
0
0
89
830
1.08
0.26
1.9
1.8
—
—
—
0
0
44
487
0.90
0.25
1.4
1.4
—
—
—
0
0
9
76
1.19
0.24
1.0
1.8
—
—
—
0
0
18
212
0.85
0.24
3.6
8.5
—
—
—
0
0
5
38
1.32
0.23
1.4
1.8
11.0
11.5
%
—
5
38
35
315
1.12
0.21
1.3
1.6
251.5
312.2
mu/l
1.15
30
284
13
107
1.22
0.21
4.2
2.7
—
—
—
0
0
192
1851
1.05
0.21
3.6
2.9
—
—
—
0
0
5
42
1.19
0.21
2.8
1.3
—
—
—
0
0
0
11
0.00
0.21
0.0
1.0
—
—
—
0
0
0
10
0.00
0.21
0.0
2.9
—
—
—
0
0
0
10
0.00
0.21
0.0
1.3
—
—
—
0
0
0
10
0.00
0.21
0.0
5.8
—
—
—
0
0
0
10
0.00
0.21
0.0
1.1
—
—
—
0
0
0
12
0.00
0.21
0.0
1.1
—
—
—
0
0
0
12
0.00
0.21
0.0
1.0
—
—
—
0
0
0
12
0.00
0.21
0.0
1.1
—
—
—
0
0
37
407
0.90
0.20
2.2
2.5
—
—
—
0
0
6
48
1.25
0.20
1.0
2.0
—
44.6
—
0
7
0
14
0.00
0.20
0.0
1.3
—
2.5
—
0
14
6
49
1.23
0.20
1.0
1.4
1.2
1.4
promille
—
6
38
14
118
1.19
0.19
1.3
1.1
—
11.6
—
0
13
6
52
1.16
0.19
1.3
1.3
—
62.3
—
0
8
8
70
1.14
0.16
2.8
2.6
—
—
—
0
0
11
93
1.19
0.14
1.3
1.5
—
—
—
0
0
51
480
1.07
0.14
4.5
3.5
1.2
1.2
mmol/l
0.28
46
414
50
471
1.07
0.13
3.5
4.3
0.1
0.1
%
0.16
11
138
82
856
0.95
0.13
1.6
1.6
—
—
—
0
0
21
190
1.11
0.13
1.5
2.0
1.8
4.9
iu/l
—
5
73
14
158
0.88
0.12
1.2
1.1
—
—
—
0
0
12
105
1.15
0.11
1.1
1.5
—
—
—
0
0
16
145
1.11
0.09
1.0
1.7
—
—
—
0
0
48
459
1.05
0.08
3.2
4.1
0.0
0.6
%
—
8
114
5
63
0.79
0.08
1.0
1.0
—
—
—
0
0
30
283
1.06
0.08
1.8
1.7
—
—
—
0
0
7
66
1.06
0.08
1.0
1.1
—
—
—
0
0
6
71
0.84
0.07
3.3
2.5
4.6
4.0
mmol/l
—
6
71
6
71
0.84
0.07
3.3
2.5
107.8
106.0
mmol/l
—
6
71
6
70
0.86
0.07
3.3
2.5
—
—
—
0
0
30
284
1.06
0.07
1.1
1.3
221.1
247.1
miu/ml
0.23
16
137
44
453
0.97
0.04
3.3
4.4
0.0
0.9
%
—
9
117
13
136
0.96
0.00
1.1
1.1
—
—
—
0
0
13
136
0.96
0.00
1.1
1.1
—
—
—
0
0
14
145
0.96
0.00
5.9
3.9
—
—
—
0
0
49
495
0.99
0.00
1.9
1.8
—
—
—
0
0
10
102
0.98
0.00
1.2
1.1
—
72.8
—
0
25
11
112
0.98
0.00
1.6
1.2
—
—
—
0
0
50
504
0.99
0.00
3.5
4.2
1.1
1.0
%
0.02
11
154
14
142
0.99
0.00
1.0
1.1
—
—
—
0
0
13
129
1.01
0.00
1.5
1.7
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
19.2
—
0
6
0
6
0.00
0.00
0.0
1.7
—
—
—
0
0
0
6
0.00
0.00
0.0
1.3
—
—
—
0
0
0
6
0.00
0.00
0.0
6.8
—
—
—
0
0
0
6
0.00
0.00
0.0
1.3
—
—
—
0
0
0
6
0.00
0.00
0.0
1.5
—
42.2
—
0
6
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
0.00
0.0
1.1
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
0
9
0.00
0.00
0.0
1.6
—
—
—
0
0
0
9
0.00
0.00
0.0
3.1
—
—
—
0
0
5
50
1.00
0.00
2.0
1.3
—
—
—
0
0
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
2.2
—
—
—
0
0
5
51
0.98
0.00
1.2
1.1
—
—
—
0
0
6
63
0.95
0.00
1.8
1.7
32.2
32.3
pg
—
6
63
7
71
0.99
0.00
2.0
2.2
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0

Mortality – FinRegistry

Association

Association between endpoint CD2_BENIGN_LIVER and mortality.

Females

Parameter HR [95% CI] p-value
CD2_BENIGN_LIVER 1.688 [1.43, 2.0] < 0.001
Birth year 0.997 [0.99, 1.01] 0.509

During the follow-up period (1.1.1998 — 31.12.2019), 253 out of 2095 females with CD2_BENIGN_LIVER died.

Males

Parameter HR [95% CI] p-value
CD2_BENIGN_LIVER 1.949 [1.56, 2.44] < 0.001
Birth year 0.991 [0.98, 1.0] 0.054

During the follow-up period (1.1.1998 — 31.12.2019), 245 out of 876 males with CD2_BENIGN_LIVER died.

Mortality risk

Mortality risk for people of age

years, who have CD2_BENIGN_LIVER.

N-year risk Females Males
1 0.149% 0.446%
5 0.979% 2.341%
10 2.673% 6.015%
15 5.274% 11.44%
20 9.294% 19.489%

Relationships between endpoints

Index endpoint: CD2_BENIGN_LIVER – Benign neoplasm: Liver

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
rg [CI]
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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